CheckQC

note

Checks a set of quality criteria against an Illumina runfolder.

https://github.com/Molmed/checkQC

DOI: 10.21105/joss.00556

GNU General Public License v3.0

The module parses a CheckQC JSON file, so make sure to use CheckQC with the --json flag and collect the stdout in a file.

File search patterns

checkqc:
  contents: instrument_and_reagent_type
  fn: '*.json'