HOPS
note
Ancient DNA characteristics screening tool of output from the metagenomic aligner MALT.
https://github.com/rhuebler/HOPS/
This module takes the JSON output of the HOPS postprocessing R script (version >= 0.34) to recreate the possible positives heatmap, with the heat intensity representing the number of 'ancient DNA characteristics' categories (small edit distance, damage, both edit distance and aDNA damage) that a particular taxon has.
File search patterns
hops:
fn: heatmap_overview_Wevid.json